Skill · em Dados, IA e pesquisa

scientific-visualization

Create publication figures with matplotlib/seaborn/plotly. Multi-panel layouts, error bars, significance markers, colorblind-safe, export PDF/EPS/TIFF, for journal-ready scientific plots.

Procedência

Antes de instalar

11 arquivos · 102 KB · inclui 3 scripts que executam: assets/color_palettes.py, scripts/figure_export.py, scripts/style_presets.py

Instalar na sua CLI

O comando baixa a versão fixada (commit 57f899e) direto da origem, para a pasta que a CLI lê. Precisa de curl (macOS e Linux); no Windows não há comando, porque o Rook Labs é para macOS.

Claude Code

Neste projeto: instala em .claude/skills/scientific-visualization/.

d=".claude/skills/scientific-visualization"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/scientific-visualization"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/assets/color_palettes.py" "$u/assets/color_palettes.py" \
  -o "$d/assets/nature.mplstyle" "$u/assets/nature.mplstyle" \
  -o "$d/assets/presentation.mplstyle" "$u/assets/presentation.mplstyle" \
  -o "$d/assets/publication.mplstyle" "$u/assets/publication.mplstyle" \
  -o "$d/references/color_palettes.md" "$u/references/color_palettes.md" \
  -o "$d/references/journal_requirements.md" "$u/references/journal_requirements.md" \
  -o "$d/references/matplotlib_examples.md" "$u/references/matplotlib_examples.md" \
  -o "$d/references/publication_guidelines.md" "$u/references/publication_guidelines.md" \
  -o "$d/scripts/figure_export.py" "$u/scripts/figure_export.py" \
  -o "$d/scripts/style_presets.py" "$u/scripts/style_presets.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.claude/skills/scientific-visualization/.

d="$HOME/.claude/skills/scientific-visualization"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/scientific-visualization"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/assets/color_palettes.py" "$u/assets/color_palettes.py" \
  -o "$d/assets/nature.mplstyle" "$u/assets/nature.mplstyle" \
  -o "$d/assets/presentation.mplstyle" "$u/assets/presentation.mplstyle" \
  -o "$d/assets/publication.mplstyle" "$u/assets/publication.mplstyle" \
  -o "$d/references/color_palettes.md" "$u/references/color_palettes.md" \
  -o "$d/references/journal_requirements.md" "$u/references/journal_requirements.md" \
  -o "$d/references/matplotlib_examples.md" "$u/references/matplotlib_examples.md" \
  -o "$d/references/publication_guidelines.md" "$u/references/publication_guidelines.md" \
  -o "$d/scripts/figure_export.py" "$u/scripts/figure_export.py" \
  -o "$d/scripts/style_presets.py" "$u/scripts/style_presets.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Codex

Neste projeto: instala em .agents/skills/scientific-visualization/.

d=".agents/skills/scientific-visualization"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/scientific-visualization"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/assets/color_palettes.py" "$u/assets/color_palettes.py" \
  -o "$d/assets/nature.mplstyle" "$u/assets/nature.mplstyle" \
  -o "$d/assets/presentation.mplstyle" "$u/assets/presentation.mplstyle" \
  -o "$d/assets/publication.mplstyle" "$u/assets/publication.mplstyle" \
  -o "$d/references/color_palettes.md" "$u/references/color_palettes.md" \
  -o "$d/references/journal_requirements.md" "$u/references/journal_requirements.md" \
  -o "$d/references/matplotlib_examples.md" "$u/references/matplotlib_examples.md" \
  -o "$d/references/publication_guidelines.md" "$u/references/publication_guidelines.md" \
  -o "$d/scripts/figure_export.py" "$u/scripts/figure_export.py" \
  -o "$d/scripts/style_presets.py" "$u/scripts/style_presets.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.agents/skills/scientific-visualization/.

d="$HOME/.agents/skills/scientific-visualization"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/scientific-visualization"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/assets/color_palettes.py" "$u/assets/color_palettes.py" \
  -o "$d/assets/nature.mplstyle" "$u/assets/nature.mplstyle" \
  -o "$d/assets/presentation.mplstyle" "$u/assets/presentation.mplstyle" \
  -o "$d/assets/publication.mplstyle" "$u/assets/publication.mplstyle" \
  -o "$d/references/color_palettes.md" "$u/references/color_palettes.md" \
  -o "$d/references/journal_requirements.md" "$u/references/journal_requirements.md" \
  -o "$d/references/matplotlib_examples.md" "$u/references/matplotlib_examples.md" \
  -o "$d/references/publication_guidelines.md" "$u/references/publication_guidelines.md" \
  -o "$d/scripts/figure_export.py" "$u/scripts/figure_export.py" \
  -o "$d/scripts/style_presets.py" "$u/scripts/style_presets.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Antigravity

Neste projeto: instala em .agents/skills/scientific-visualization/.

d=".agents/skills/scientific-visualization"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/scientific-visualization"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/assets/color_palettes.py" "$u/assets/color_palettes.py" \
  -o "$d/assets/nature.mplstyle" "$u/assets/nature.mplstyle" \
  -o "$d/assets/presentation.mplstyle" "$u/assets/presentation.mplstyle" \
  -o "$d/assets/publication.mplstyle" "$u/assets/publication.mplstyle" \
  -o "$d/references/color_palettes.md" "$u/references/color_palettes.md" \
  -o "$d/references/journal_requirements.md" "$u/references/journal_requirements.md" \
  -o "$d/references/matplotlib_examples.md" "$u/references/matplotlib_examples.md" \
  -o "$d/references/publication_guidelines.md" "$u/references/publication_guidelines.md" \
  -o "$d/scripts/figure_export.py" "$u/scripts/figure_export.py" \
  -o "$d/scripts/style_presets.py" "$u/scripts/style_presets.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.gemini/antigravity-cli/skills/scientific-visualization/.

d="$HOME/.gemini/antigravity-cli/skills/scientific-visualization"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/scientific-visualization"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/assets/color_palettes.py" "$u/assets/color_palettes.py" \
  -o "$d/assets/nature.mplstyle" "$u/assets/nature.mplstyle" \
  -o "$d/assets/presentation.mplstyle" "$u/assets/presentation.mplstyle" \
  -o "$d/assets/publication.mplstyle" "$u/assets/publication.mplstyle" \
  -o "$d/references/color_palettes.md" "$u/references/color_palettes.md" \
  -o "$d/references/journal_requirements.md" "$u/references/journal_requirements.md" \
  -o "$d/references/matplotlib_examples.md" "$u/references/matplotlib_examples.md" \
  -o "$d/references/publication_guidelines.md" "$u/references/publication_guidelines.md" \
  -o "$d/scripts/figure_export.py" "$u/scripts/figure_export.py" \
  -o "$d/scripts/style_presets.py" "$u/scripts/style_presets.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Peça ao Rook

Já usa o Rook Labs? Cole no chat do Rook: instale a skill https://rooklabs.sh/marketplace/cct.scientific-visualization

Prévia do SKILL.md

---
name: scientific-visualization
description: "Create publication figures with matplotlib/seaborn/plotly. Multi-panel layouts, error bars, significance markers, colorblind-safe, export PDF/EPS/TIFF, for journal-ready scientific plots."
---

# Scientific Visualization

## Overview

Scientific visualization transforms data into clear, accurate figures for publication. Create journal-ready plots with multi-panel layouts, error bars, significance markers, and colorblind-safe palettes. Export as PDF/EPS/TIFF using matplotlib, seaborn, and plotly for manuscripts.

## When to Use This Skill

This skill should be used when:
- Creating plots or visualizations for scientific manuscripts
- Preparing figures for journal submission (Nature, Science, Cell, PLOS, etc.)
- Ensuring figures are colorblind-friendly and accessible
- Making multi-panel figures with consistent styling
- Exporting figures at correct resolution and format
- Following specific publication guidelines
- Improving existing figures to meet publication standards
- Creating figures that need to work in both color and grayscale

## Quick Start Guide

### Basic Publication-Quality Figure

```python
import matplotlib.pyplot as plt
import numpy as np

# Apply publication style (from scripts/style_presets.py)
from style_presets import apply_publication_style
apply_publication_style('default')

# Create figure with appropriate size (single column = 3.5 inches)
fig, ax = plt.subplots(figsize=(3.5, 2.5))

# Plot data
x = np.linspace(0, 10, 100)
…

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