Skill · em Dados, IA e pesquisa

labarchive-integration

Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate with Protocols.io/Jupyter/REDCap, for programmatic ELN workflows.

Procedência

Antes de instalar

7 arquivos · 65,8 KB · inclui 3 scripts que executam: scripts/entry_operations.py, scripts/notebook_operations.py, scripts/setup_config.py

Instalar na sua CLI

O comando baixa a versão fixada (commit 57f899e) direto da origem, para a pasta que a CLI lê. Precisa de curl (macOS e Linux); no Windows não há comando, porque o Rook Labs é para macOS.

Claude Code

Neste projeto: instala em .claude/skills/labarchive-integration/.

d=".claude/skills/labarchive-integration"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/labarchive-integration"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/api_reference.md" "$u/references/api_reference.md" \
  -o "$d/references/authentication_guide.md" "$u/references/authentication_guide.md" \
  -o "$d/references/integrations.md" "$u/references/integrations.md" \
  -o "$d/scripts/entry_operations.py" "$u/scripts/entry_operations.py" \
  -o "$d/scripts/notebook_operations.py" "$u/scripts/notebook_operations.py" \
  -o "$d/scripts/setup_config.py" "$u/scripts/setup_config.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.claude/skills/labarchive-integration/.

d="$HOME/.claude/skills/labarchive-integration"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/labarchive-integration"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/api_reference.md" "$u/references/api_reference.md" \
  -o "$d/references/authentication_guide.md" "$u/references/authentication_guide.md" \
  -o "$d/references/integrations.md" "$u/references/integrations.md" \
  -o "$d/scripts/entry_operations.py" "$u/scripts/entry_operations.py" \
  -o "$d/scripts/notebook_operations.py" "$u/scripts/notebook_operations.py" \
  -o "$d/scripts/setup_config.py" "$u/scripts/setup_config.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Codex

Neste projeto: instala em .agents/skills/labarchive-integration/.

d=".agents/skills/labarchive-integration"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/labarchive-integration"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/api_reference.md" "$u/references/api_reference.md" \
  -o "$d/references/authentication_guide.md" "$u/references/authentication_guide.md" \
  -o "$d/references/integrations.md" "$u/references/integrations.md" \
  -o "$d/scripts/entry_operations.py" "$u/scripts/entry_operations.py" \
  -o "$d/scripts/notebook_operations.py" "$u/scripts/notebook_operations.py" \
  -o "$d/scripts/setup_config.py" "$u/scripts/setup_config.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.agents/skills/labarchive-integration/.

d="$HOME/.agents/skills/labarchive-integration"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/labarchive-integration"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/api_reference.md" "$u/references/api_reference.md" \
  -o "$d/references/authentication_guide.md" "$u/references/authentication_guide.md" \
  -o "$d/references/integrations.md" "$u/references/integrations.md" \
  -o "$d/scripts/entry_operations.py" "$u/scripts/entry_operations.py" \
  -o "$d/scripts/notebook_operations.py" "$u/scripts/notebook_operations.py" \
  -o "$d/scripts/setup_config.py" "$u/scripts/setup_config.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Antigravity

Neste projeto: instala em .agents/skills/labarchive-integration/.

d=".agents/skills/labarchive-integration"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/labarchive-integration"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/api_reference.md" "$u/references/api_reference.md" \
  -o "$d/references/authentication_guide.md" "$u/references/authentication_guide.md" \
  -o "$d/references/integrations.md" "$u/references/integrations.md" \
  -o "$d/scripts/entry_operations.py" "$u/scripts/entry_operations.py" \
  -o "$d/scripts/notebook_operations.py" "$u/scripts/notebook_operations.py" \
  -o "$d/scripts/setup_config.py" "$u/scripts/setup_config.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.gemini/antigravity-cli/skills/labarchive-integration/.

d="$HOME/.gemini/antigravity-cli/skills/labarchive-integration"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/labarchive-integration"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/api_reference.md" "$u/references/api_reference.md" \
  -o "$d/references/authentication_guide.md" "$u/references/authentication_guide.md" \
  -o "$d/references/integrations.md" "$u/references/integrations.md" \
  -o "$d/scripts/entry_operations.py" "$u/scripts/entry_operations.py" \
  -o "$d/scripts/notebook_operations.py" "$u/scripts/notebook_operations.py" \
  -o "$d/scripts/setup_config.py" "$u/scripts/setup_config.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Peça ao Rook

Já usa o Rook Labs? Cole no chat do Rook: instale a skill https://rooklabs.sh/marketplace/cct.labarchive-integration

Prévia do SKILL.md

---
name: labarchive-integration
description: "Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate with Protocols.io/Jupyter/REDCap, for programmatic ELN workflows."
---

# LabArchives Integration

## Overview

LabArchives is an electronic lab notebook platform for research documentation and data management. Access notebooks, manage entries and attachments, generate reports, and integrate with third-party tools programmatically via REST API.

## When to Use This Skill

This skill should be used when:
- Working with LabArchives REST API for notebook automation
- Backing up notebooks programmatically
- Creating or managing notebook entries and attachments
- Generating site reports and analytics
- Integrating LabArchives with third-party tools (Protocols.io, Jupyter, REDCap)
- Automating data upload to electronic lab notebooks
- Managing user access and permissions programmatically

## Core Capabilities

### 1. Authentication and Configuration

Set up API access credentials and regional endpoints for LabArchives API integration.

**Prerequisites:**
- Enterprise LabArchives license with API access enabled
- API access key ID and password from LabArchives administrator
- User authentication credentials (email and external applications password)

**Configuration setup:**

Use the `scripts/setup_config.py` script to create a configuration file:

```bash
python3 scripts/setup_config.py
```
…

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