Skill · em Dados, IA e pesquisa

gtars

High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, or fragment analysis in computational genomics and machine learning applications.

Procedência

Origem: davila7/claude-code-templates
Caminho: cli-tool/components/skills/scientific/gtars
Versão fixada: 57f899e5394bb8ca166f38eacae8f0853cbfe033
Licença: MIT
Espelhado em 25/09/2026
1 download no Claude Code Templates (lido em 25/09/2026)

Antes de instalar

7 arquivos · 29,6 KB · só texto, nenhum script

Instalar na sua CLI

O comando baixa a versão fixada (commit 57f899e) direto da origem, para a pasta que a CLI lê. Precisa de curl (macOS e Linux); no Windows não há comando, porque o Rook Labs é para macOS.

Claude Code

Neste projeto: instala em .claude/skills/gtars/.

d=".claude/skills/gtars"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/gtars"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/cli.md" "$u/references/cli.md" \
  -o "$d/references/coverage.md" "$u/references/coverage.md" \
  -o "$d/references/overlap.md" "$u/references/overlap.md" \
  -o "$d/references/python-api.md" "$u/references/python-api.md" \
  -o "$d/references/refget.md" "$u/references/refget.md" \
  -o "$d/references/tokenizers.md" "$u/references/tokenizers.md" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.claude/skills/gtars/.

d="$HOME/.claude/skills/gtars"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/gtars"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/cli.md" "$u/references/cli.md" \
  -o "$d/references/coverage.md" "$u/references/coverage.md" \
  -o "$d/references/overlap.md" "$u/references/overlap.md" \
  -o "$d/references/python-api.md" "$u/references/python-api.md" \
  -o "$d/references/refget.md" "$u/references/refget.md" \
  -o "$d/references/tokenizers.md" "$u/references/tokenizers.md" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Codex

Neste projeto: instala em .agents/skills/gtars/.

d=".agents/skills/gtars"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/gtars"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/cli.md" "$u/references/cli.md" \
  -o "$d/references/coverage.md" "$u/references/coverage.md" \
  -o "$d/references/overlap.md" "$u/references/overlap.md" \
  -o "$d/references/python-api.md" "$u/references/python-api.md" \
  -o "$d/references/refget.md" "$u/references/refget.md" \
  -o "$d/references/tokenizers.md" "$u/references/tokenizers.md" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.agents/skills/gtars/.

d="$HOME/.agents/skills/gtars"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/gtars"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/cli.md" "$u/references/cli.md" \
  -o "$d/references/coverage.md" "$u/references/coverage.md" \
  -o "$d/references/overlap.md" "$u/references/overlap.md" \
  -o "$d/references/python-api.md" "$u/references/python-api.md" \
  -o "$d/references/refget.md" "$u/references/refget.md" \
  -o "$d/references/tokenizers.md" "$u/references/tokenizers.md" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Antigravity

Neste projeto: instala em .agents/skills/gtars/.

d=".agents/skills/gtars"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/gtars"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/cli.md" "$u/references/cli.md" \
  -o "$d/references/coverage.md" "$u/references/coverage.md" \
  -o "$d/references/overlap.md" "$u/references/overlap.md" \
  -o "$d/references/python-api.md" "$u/references/python-api.md" \
  -o "$d/references/refget.md" "$u/references/refget.md" \
  -o "$d/references/tokenizers.md" "$u/references/tokenizers.md" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.gemini/antigravity-cli/skills/gtars/.

d="$HOME/.gemini/antigravity-cli/skills/gtars"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/gtars"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/cli.md" "$u/references/cli.md" \
  -o "$d/references/coverage.md" "$u/references/coverage.md" \
  -o "$d/references/overlap.md" "$u/references/overlap.md" \
  -o "$d/references/python-api.md" "$u/references/python-api.md" \
  -o "$d/references/refget.md" "$u/references/refget.md" \
  -o "$d/references/tokenizers.md" "$u/references/tokenizers.md" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Peça ao Rook

Já usa o Rook Labs? Cole no chat do Rook: instale a skill https://rooklabs.sh/marketplace/cct.gtars

Prévia do SKILL.md

---
name: gtars
description: High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, or fragment analysis in computational genomics and machine learning applications.
---

# Gtars: Genomic Tools and Algorithms in Rust

## Overview

Gtars is a high-performance Rust toolkit for manipulating, analyzing, and processing genomic interval data. It provides specialized tools for overlap detection, coverage analysis, tokenization for machine learning, and reference sequence management.

Use this skill when working with:
- Genomic interval files (BED format)
- Overlap detection between genomic regions
- Coverage track generation (WIG, BigWig)
- Genomic ML preprocessing and tokenization
- Fragment analysis in single-cell genomics
- Reference sequence retrieval and validation

## Installation

### Python Installation

Install gtars Python bindings:

```bash
uv uv pip install gtars
```

### CLI Installation

Install command-line tools (requires Rust/Cargo):

```bash
# Install with all features
cargo install gtars-cli --features "uniwig overlaprs igd bbcache scoring fragsplit"

# Or install specific features only
cargo install gtars-cli --features "uniwig overlaprs"
```
…

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