Skill · em Dados, IA e pesquisa

drugbank-database

Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies,…

Procedência

Antes de instalar

7 arquivos · 88,3 KB · inclui 1 script que executa: scripts/drugbank_helper.py

Instalar na sua CLI

O comando baixa a versão fixada (commit 57f899e) direto da origem, para a pasta que a CLI lê. Precisa de curl (macOS e Linux); no Windows não há comando, porque o Rook Labs é para macOS.

Claude Code

Neste projeto: instala em .claude/skills/drugbank-database/.

d=".claude/skills/drugbank-database"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/drugbank-database"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/chemical-analysis.md" "$u/references/chemical-analysis.md" \
  -o "$d/references/data-access.md" "$u/references/data-access.md" \
  -o "$d/references/drug-queries.md" "$u/references/drug-queries.md" \
  -o "$d/references/interactions.md" "$u/references/interactions.md" \
  -o "$d/references/targets-pathways.md" "$u/references/targets-pathways.md" \
  -o "$d/scripts/drugbank_helper.py" "$u/scripts/drugbank_helper.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.claude/skills/drugbank-database/.

d="$HOME/.claude/skills/drugbank-database"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/drugbank-database"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/chemical-analysis.md" "$u/references/chemical-analysis.md" \
  -o "$d/references/data-access.md" "$u/references/data-access.md" \
  -o "$d/references/drug-queries.md" "$u/references/drug-queries.md" \
  -o "$d/references/interactions.md" "$u/references/interactions.md" \
  -o "$d/references/targets-pathways.md" "$u/references/targets-pathways.md" \
  -o "$d/scripts/drugbank_helper.py" "$u/scripts/drugbank_helper.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Codex

Neste projeto: instala em .agents/skills/drugbank-database/.

d=".agents/skills/drugbank-database"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/drugbank-database"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/chemical-analysis.md" "$u/references/chemical-analysis.md" \
  -o "$d/references/data-access.md" "$u/references/data-access.md" \
  -o "$d/references/drug-queries.md" "$u/references/drug-queries.md" \
  -o "$d/references/interactions.md" "$u/references/interactions.md" \
  -o "$d/references/targets-pathways.md" "$u/references/targets-pathways.md" \
  -o "$d/scripts/drugbank_helper.py" "$u/scripts/drugbank_helper.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.agents/skills/drugbank-database/.

d="$HOME/.agents/skills/drugbank-database"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/drugbank-database"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/chemical-analysis.md" "$u/references/chemical-analysis.md" \
  -o "$d/references/data-access.md" "$u/references/data-access.md" \
  -o "$d/references/drug-queries.md" "$u/references/drug-queries.md" \
  -o "$d/references/interactions.md" "$u/references/interactions.md" \
  -o "$d/references/targets-pathways.md" "$u/references/targets-pathways.md" \
  -o "$d/scripts/drugbank_helper.py" "$u/scripts/drugbank_helper.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Antigravity

Neste projeto: instala em .agents/skills/drugbank-database/.

d=".agents/skills/drugbank-database"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/drugbank-database"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/chemical-analysis.md" "$u/references/chemical-analysis.md" \
  -o "$d/references/data-access.md" "$u/references/data-access.md" \
  -o "$d/references/drug-queries.md" "$u/references/drug-queries.md" \
  -o "$d/references/interactions.md" "$u/references/interactions.md" \
  -o "$d/references/targets-pathways.md" "$u/references/targets-pathways.md" \
  -o "$d/scripts/drugbank_helper.py" "$u/scripts/drugbank_helper.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Global: instala em ~/.gemini/antigravity-cli/skills/drugbank-database/.

d="$HOME/.gemini/antigravity-cli/skills/drugbank-database"
u="https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/cli-tool/components/skills/scientific/drugbank-database"
curl -fsSL --create-dirs \
  -o "$d/SKILL.md" "$u/SKILL.md" \
  -o "$d/references/chemical-analysis.md" "$u/references/chemical-analysis.md" \
  -o "$d/references/data-access.md" "$u/references/data-access.md" \
  -o "$d/references/drug-queries.md" "$u/references/drug-queries.md" \
  -o "$d/references/interactions.md" "$u/references/interactions.md" \
  -o "$d/references/targets-pathways.md" "$u/references/targets-pathways.md" \
  -o "$d/scripts/drugbank_helper.py" "$u/scripts/drugbank_helper.py" \
  -o "$d/LICENSE" "https://raw.githubusercontent.com/davila7/claude-code-templates/57f899e5394bb8ca166f38eacae8f0853cbfe033/LICENSE"

Peça ao Rook

Já usa o Rook Labs? Cole no chat do Rook: instale a skill https://rooklabs.sh/marketplace/cct.drugbank-database

Prévia do SKILL.md

---
name: drugbank-database
description: Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug inte…
---

# DrugBank Database

## Overview

DrugBank is a comprehensive bioinformatics and cheminformatics database containing detailed information on drugs and drug targets. This skill enables programmatic access to DrugBank data including ~9,591 drug entries (2,037 FDA-approved small molecules, 241 biotech drugs, 96 nutraceuticals, and 6,000+ experimental comp…

## Core Capabilities

### 1. Data Access and Authentication

Download and access DrugBank data using Python with proper authentication. The skill provides guidance on:

- Installing and configuring the `drugbank-downloader` package
- Managing credentials securely via environment variables or config files
- Downloading specific or latest database versions
- Opening and parsing XML data efficiently
- Working with cached data to optimize performance

**When to use**: Setting up DrugBank access, downloading database updates, initial project configuration.

**Reference**: See `references/data-access.md` for detailed authentication, download procedures, API access, caching strategies, and troubleshooting.

### 2. Drug Information Queries

Extract comprehensive drug information from the database including identifiers, chemical properties, pharmacology, clinical data, and cross-references to external databases.

**Query capabilities**:
- Search by DrugBank ID, name, CAS number, or keywords
- Extract basic drug information (name, type, description, indication)
- Retrieve chemical properties (SMILES, InChI, molecular formula)
- Get pharmacology data (mechanism of action, pharmacodynamics, ADME)
- Access external identifiers (PubChem, ChEMBL, UniProt, KEGG)
- Build searchable drug datasets and export to DataFrames
- Filter drugs by type (small molecule, biotech, nutraceutical)
…

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